| Interface | Description |
|---|---|
| VDJCUsageDistribution |
Represents "abstract" distribution of V, D, J, C genes.
|
| VDJCUsageDistributionInstance |
Represents actual distribution of V, D, J, C genes.
|
| Class | Description |
|---|---|
| ConcatenatedLazySequence<S extends com.milaboratory.core.sequence.Sequence<S>> | |
| DTrimming |
Represents information on number of nucleotides deleted from 5' and 3' D; or sizes of corresponding
P-segments.
|
| GClone |
Represents single clonotype
|
| GGene |
Represents rearranged TCR/IG gene / sequence.
|
| GRepertoire |
Represents immunological clone repertoire
|
| GRepertoireReader | |
| GRepertoireWriter | |
| VDJCGenes |
Tuple of VDJC genes.
|
| VDJTrimming |
Represents information on number of nucleotides deleted from 3' V, 5' J and both sides of D gene, if present;
or sizes of corresponding P-segments.
|