io.repseq.gen.dist

Class CommonNormalGeneTrimmingModel

java.lang.Object

io.repseq.gen.dist.CommonNormalGeneTrimmingModel

All Implemented Interfaces:

GeneTrimmingModel, Model

public final class CommonNormalGeneTrimmingModel
extends java.lang.Object
implements GeneTrimmingModel

Field Summary

Fields

Modifier and Type	Field and Description
int	maxPLength
NormalDistributionParameters	parameters

Constructor Summary

Constructors

Constructor and Description
CommonNormalGeneTrimmingModel(double mu, double sigma, int maxPLength)

Method Summary

Modifier and Type	Method and Description
static GeneFeature	cdr3Part(GeneType geneType)
GeneTrimmingGenerator	create(org.apache.commons.math3.random.RandomGenerator random, VDJCGene gene)
boolean	equals(java.lang.Object o)
int	hashCode()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Field Detail

parameters

public final NormalDistributionParameters parameters

maxPLength

public final int maxPLength

Constructor Detail

CommonNormalGeneTrimmingModel

public CommonNormalGeneTrimmingModel(double mu,
                                     double sigma,
                                     int maxPLength)

Method Detail

cdr3Part

public static GeneFeature cdr3Part(GeneType geneType)

create

public GeneTrimmingGenerator create(org.apache.commons.math3.random.RandomGenerator random,
                                    VDJCGene gene)

Specified by:

create in interface GeneTrimmingModel

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object