io.repseq.core

Class VDJCLibraryRegistry.FolderLibraryResolver

java.lang.Object

io.repseq.core.VDJCLibraryRegistry.FolderLibraryResolver

All Implemented Interfaces:

VDJCLibraryRegistry.AliasResolver, VDJCLibraryRegistry.LibraryNameListProvider, VDJCLibraryRegistry.LibraryResolver

Enclosing class:

VDJCLibraryRegistry

public static final class VDJCLibraryRegistry.FolderLibraryResolver
extends java.lang.Object
implements VDJCLibraryRegistry.LibraryResolver, VDJCLibraryRegistry.AliasResolver, VDJCLibraryRegistry.LibraryNameListProvider

Load library data from {libraryName}.json files in specified folder.

Constructor Summary

Constructors

Constructor and Description
FolderLibraryResolver(java.nio.file.Path path, boolean searchForPartialNames)

Method Summary

Modifier and Type	Method and Description
java.nio.file.Path	getContext(java.lang.String libraryName)
java.util.List<java.lang.String>	getLibraryNameList()
java.nio.file.Path	getPath()
VDJCLibraryData[]	resolve(java.lang.String libraryName)
java.lang.String	resolveAlias(java.lang.String libraryName)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FolderLibraryResolver

public FolderLibraryResolver(java.nio.file.Path path,
                             boolean searchForPartialNames)

Method Detail

getPath

public java.nio.file.Path getPath()

getContext

public java.nio.file.Path getContext(java.lang.String libraryName)

Specified by:

getContext in interface VDJCLibraryRegistry.LibraryResolver

getLibraryNameList

public java.util.List<java.lang.String> getLibraryNameList()

Specified by:

getLibraryNameList in interface VDJCLibraryRegistry.LibraryNameListProvider

resolveAlias

public java.lang.String resolveAlias(java.lang.String libraryName)

Specified by:

resolveAlias in interface VDJCLibraryRegistry.AliasResolver

resolve

public VDJCLibraryData[] resolve(java.lang.String libraryName)

Specified by:

resolve in interface VDJCLibraryRegistry.LibraryResolver