io.repseq.core

Class GeneFeatureSerializer

java.lang.Object

io.repseq.core.GeneFeatureSerializer

All Implemented Interfaces:

com.milaboratory.primitivio.Serializer<GeneFeature>

public final class GeneFeatureSerializer
extends java.lang.Object
implements com.milaboratory.primitivio.Serializer<GeneFeature>

Constructor Summary

Constructors

Constructor and Description
GeneFeatureSerializer()
GeneFeatureSerializer(boolean saveRef) Constructor for custom serialization

Method Summary

Modifier and Type	Method and Description
boolean	handlesReference()
boolean	isReference()
GeneFeature	read(com.milaboratory.primitivio.PrimitivI input)
void	write(com.milaboratory.primitivio.PrimitivO output, GeneFeature object)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GeneFeatureSerializer

public GeneFeatureSerializer()

GeneFeatureSerializer

public GeneFeatureSerializer(boolean saveRef)

Constructor for custom serialization

Parameters:

saveRef - if true will write full gene feature content only once, not suitable for random access files

Method Detail

write

public void write(com.milaboratory.primitivio.PrimitivO output,
                  GeneFeature object)

Specified by:

write in interface com.milaboratory.primitivio.Serializer<GeneFeature>

read

public GeneFeature read(com.milaboratory.primitivio.PrimitivI input)

Specified by:

read in interface com.milaboratory.primitivio.Serializer<GeneFeature>

isReference

public boolean isReference()

Specified by:

isReference in interface com.milaboratory.primitivio.Serializer<GeneFeature>

handlesReference

public boolean handlesReference()

Specified by:

handlesReference in interface com.milaboratory.primitivio.Serializer<GeneFeature>