io.repseq.core

Class AbstractReferencePointsBuilder<T extends AbstractReferencePoints<T>>

java.lang.Object

io.repseq.core.AbstractReferencePointsBuilder<T>

Direct Known Subclasses:

ExtendedReferencePointsBuilder, ReferencePointsBuilder

public abstract class AbstractReferencePointsBuilder<T extends AbstractReferencePoints<T>>
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
AbstractReferencePointsBuilder(boolean[] pointsToCheck)

Method Summary

Modifier and Type	Method and Description
T	build()
protected abstract T	create(int[] points)
protected abstract int	indexFromBasicReferencePoint(io.repseq.core.BasicReferencePoint point)
void	setPosition(ReferencePoint referencePoint, int position)
void	setPositionsFrom(AbstractReferencePoints points)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AbstractReferencePointsBuilder

public AbstractReferencePointsBuilder(boolean[] pointsToCheck)

Method Detail

create

protected abstract T create(int[] points)

indexFromBasicReferencePoint

protected abstract int indexFromBasicReferencePoint(io.repseq.core.BasicReferencePoint point)

setPosition

public void setPosition(ReferencePoint referencePoint,
                        int position)

setPositionsFrom

public void setPositionsFrom(AbstractReferencePoints points)

build

public T build()