Hierarchy For Package io.repseq.cli

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • com.milaboratory.cli.ActionParameters
    • com.milaboratory.cli.ActionParametersWithOutput
      • io.repseq.cli.CompileAction.Params
      • io.repseq.cli.ExportCloneSequencesAction.Params
      • io.repseq.cli.FastaAction.Params
      • io.repseq.cli.FilterAction.Params
      • io.repseq.cli.FromFastaParametersAbstract
        • io.repseq.cli.FromFastaAction.ActionParameters
        • io.repseq.cli.FromPaddedFastaAction.ActionParameters
      • io.repseq.cli.GenerateClonesAction.Params
      • io.repseq.cli.InferAnchorPointsAction.Params
      • io.repseq.cli.MergeAction.Params
      • io.repseq.cli.NormalizeCloneAbundancesAction.Params
      • io.repseq.cli.TsvAction.Params
    • io.repseq.cli.CheckAction.Params
    • io.repseq.cli.DebugAction.Params
    • io.repseq.cli.FormatAction.Params
    • io.repseq.cli.ListAction.Params
    • io.repseq.cli.StatAction.Params
  • io.repseq.cli.CheckAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.CLIUtils
  • io.repseq.cli.CLIUtils.GeneFeatureConverter (implements com.beust.jcommander.IStringConverter<T>)
  • io.repseq.cli.CLIUtils.GeneFeatureSplitter (implements com.beust.jcommander.converters.IParameterSplitter)
  • io.repseq.cli.CLIUtils.GeneFeatureValidator (implements com.beust.jcommander.IParameterValidator)
  • io.repseq.cli.CLIUtils.GeneFeatureWithOriginalName
  • io.repseq.cli.CompileAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.DebugAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.ExportCloneSequencesAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.FastaAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.FilterAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.FormatAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.FromFastaActionAbstract<P> (implements com.milaboratory.cli.Action)
    • io.repseq.cli.FromFastaAction
    • io.repseq.cli.FromPaddedFastaAction
  • io.repseq.cli.FromFastaActionAbstract.EmbeddedWriter
  • io.repseq.cli.FromFastaActionAbstract.ExistingFileWriter
  • io.repseq.cli.FromFastaActionAbstract.FastaSequenceStorage
  • io.repseq.cli.GenerateClonesAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.InferAnchorPointsAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.ListAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.Main
  • io.repseq.cli.MergeAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.ModifyLibraryAction
  • io.repseq.cli.NormalizeCloneAbundancesAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.StatAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.TsvAction (implements com.milaboratory.cli.Action)
  • io.repseq.cli.TsvAction.NameAndGeneFeature