Package io.repseq.cli

Class Summary

Class	Description
CheckAction
CheckAction.Params
CLIUtils
CLIUtils.GeneFeatureConverter
CLIUtils.GeneFeatureSplitter
CLIUtils.GeneFeatureValidator
CLIUtils.GeneFeatureWithOriginalName	Represents pair of gene feature object along with original string representation specified by user.
CompileAction
CompileAction.Params
DebugAction
DebugAction.Params
ExportCloneSequencesAction
ExportCloneSequencesAction.Params
FastaAction
FastaAction.Params
FilterAction
FilterAction.Params
FormatAction
FormatAction.Params
FromFastaAction
FromFastaAction.ActionParameters
FromFastaActionAbstract<P extends FromFastaParametersAbstract>
FromFastaParametersAbstract
FromPaddedFastaAction
FromPaddedFastaAction.ActionParameters
GenerateClonesAction
GenerateClonesAction.Params
InferAnchorPointsAction
InferAnchorPointsAction.Params
ListAction
ListAction.Params
Main
MergeAction
MergeAction.Params
ModifyLibraryAction
NormalizeCloneAbundancesAction
NormalizeCloneAbundancesAction.Params
StatAction
StatAction.Params
TsvAction
TsvAction.NameAndGeneFeature
TsvAction.Params