public final class CLIUtils
extends java.lang.Object
| Modifier and Type | Class and Description |
|---|---|
static class |
CLIUtils.GeneFeatureConverter |
static class |
CLIUtils.GeneFeatureSplitter |
static class |
CLIUtils.GeneFeatureValidator |
static class |
CLIUtils.GeneFeatureWithOriginalName
Represents pair of gene feature object along with original string representation specified by user.
|
| Modifier and Type | Method and Description |
|---|---|
static java.io.BufferedOutputStream |
createBufferedOutputStream(java.lang.String fileName) |
static java.io.BufferedReader |
createBufferedReader(java.lang.String fileName) |
static com.milaboratory.core.io.sequence.fasta.FastaWriter<com.milaboratory.core.sequence.NucleotideSequence> |
createSingleFastaWriter(java.lang.String fileName) |
public static java.io.BufferedReader createBufferedReader(java.lang.String fileName)
throws java.io.IOException
java.io.IOExceptionpublic static java.io.BufferedOutputStream createBufferedOutputStream(java.lang.String fileName)
throws java.io.IOException
java.io.IOExceptionpublic static com.milaboratory.core.io.sequence.fasta.FastaWriter<com.milaboratory.core.sequence.NucleotideSequence> createSingleFastaWriter(java.lang.String fileName)
throws java.io.IOException
java.io.IOException