Uses of Interface
io.repseq.seqbase.SequenceResolver

Packages that use SequenceResolver

Package	Description
io.repseq.core
io.repseq.seqbase

Uses of SequenceResolver in io.repseq.core

Methods in io.repseq.core that return SequenceResolver

Modifier and Type	Method and Description
SequenceResolver	VDJCLibraryRegistry.getSequenceResolver() Return sequence resolver used by this registry

Methods in io.repseq.core with parameters of type SequenceResolver

Modifier and Type	Method and Description
static void	VDJCLibraryRegistry.resetDefaultRegistry(SequenceResolver resolver) Resets default VDJLibrary registry and sets specific sequence resolver
com.milaboratory.core.sequence.provider.SequenceProvider<com.milaboratory.core.sequence.NucleotideSequence>	BaseSequence.resolve(Path context, SequenceResolver resolver) Returns SequenceProvider to access underlying sequence

Constructors in io.repseq.core with parameters of type SequenceResolver

Constructor and Description
VDJCLibraryRegistry(SequenceResolver sequenceResolver) Creates new VDJCLibraryRegistry with specific sequence resolver.

Uses of SequenceResolver in io.repseq.seqbase

Subinterfaces of SequenceResolver in io.repseq.seqbase

Modifier and Type	Interface and Description
interface	OptionalSequenceResolver Resolver for individual type of address

Classes in io.repseq.seqbase that implement SequenceResolver

Modifier and Type	Class and Description
class	AbstractRAFastaResolver
class	AnySequenceResolver
class	HTTPFastaSequenceResolver
class	HTTPRedirectSequenceResolver
static class	HTTPSequenceResolvers.NucCoreResolver nuccore://568815591
class	LocalFileResolver
class	MultiSequenceResolver

Methods in io.repseq.seqbase that return SequenceResolver

Modifier and Type	Method and Description
static SequenceResolver	SequenceResolvers.getDefault()
SequenceResolver	HTTPRedirectSequenceResolver.getParent()

Methods in io.repseq.seqbase with parameters of type SequenceResolver

Modifier and Type	Method and Description
void	ParentAwareResolver.registerParent(SequenceResolver parentResolver) Parent resolver invokes this method to provide link to itself for child
void	HTTPRedirectSequenceResolver.registerParent(SequenceResolver parentResolver)