public abstract class MarkovInsertModel extends Object implements InsertModel
| Modifier and Type | Class and Description |
|---|---|
static class |
MarkovInsertModel.Model3 |
static class |
MarkovInsertModel.Model5 |
| Modifier and Type | Field and Description |
|---|---|
Map<String,Double> |
distribution
Map like:
"A>C": 0.3,
"A>A": 0.1
|
IndependentIntModel |
lengthDistribution |
public final IndependentIntModel lengthDistribution
public InsertGenerator create(org.apache.commons.math3.random.RandomGenerator random, boolean v, List<VDJCGene> vGenes, List<VDJCGene> dGenes, List<VDJCGene> jGenes, List<VDJCGene> cGenes)
InsertModelcreate in interface InsertModelrandom - source of random datav - true for V(J/D) insert, false for DJ insertCopyright © 2017. All rights reserved.