Uses of Class
io.repseq.dto.KnownSequenceFragmentData

Packages that use KnownSequenceFragmentData

Package	Description
io.repseq.dto

Uses of KnownSequenceFragmentData in io.repseq.dto

Methods in io.repseq.dto that return types with arguments of type KnownSequenceFragmentData

Modifier and Type	Method and Description
static List<KnownSequenceFragmentData>	VDJCDataUtils.extractFragments(URI uri, com.milaboratory.core.sequence.provider.CachedSequenceProvider<com.milaboratory.core.sequence.NucleotideSequence> provider)
List<KnownSequenceFragmentData>	VDJCDataUtils.FragmentsBuilder.getFragments()
List<KnownSequenceFragmentData>	VDJCLibraryData.getSequenceFragments()

Methods in io.repseq.dto with parameters of type KnownSequenceFragmentData

Modifier and Type	Method and Description
void	VDJCDataUtils.FragmentsBuilder.addRegion(KnownSequenceFragmentData fragment)
int	KnownSequenceFragmentData.compareTo(KnownSequenceFragmentData o)

Constructor parameters in io.repseq.dto with type arguments of type KnownSequenceFragmentData

Constructor and Description
VDJCLibraryData(long taxonId, List<String> speciesNames, List<VDJCGeneData> genes, List<VDJCLibraryNote> notes, List<KnownSequenceFragmentData> sequenceFragments)