Hierarchy For Package io.repseq.core

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • io.repseq.core.AbstractReferencePointsBuilder<T>
    • io.repseq.core.ExtendedReferencePointsBuilder
    • io.repseq.core.ReferencePointsBuilder
  • io.repseq.core.BaseSequence
  • io.repseq.core.Chains (implements java.lang.Iterable<T>)
  • io.repseq.core.GeneFeature (implements java.lang.Comparable<T>, java.lang.Iterable<T>, java.io.Serializable)
  • io.repseq.core.GeneFeature.ReferenceRange (implements java.io.Serializable)
  • io.repseq.core.GeneFeatureSerializer (implements com.milaboratory.primitivio.Serializer<T>)
  • com.fasterxml.jackson.databind.JsonDeserializer<T>
    • io.repseq.core.BaseSequence.Deserializer
    • io.repseq.core.GeneFeature.Deserializer
    • io.repseq.core.GeneType.Deserializer
    • io.repseq.core.ReferencePoint.Deserializer
    • io.repseq.core.ReferencePoints.JDeserializer
  • com.fasterxml.jackson.databind.JsonSerializer<T> (implements com.fasterxml.jackson.databind.jsonFormatVisitors.JsonFormatVisitable)
    • io.repseq.core.BaseSequence.Serializer
    • io.repseq.core.GeneFeature.Serializer
    • io.repseq.core.GeneType.Serializer
    • io.repseq.core.ReferencePoint.JsonKeySerializer
    • io.repseq.core.ReferencePoint.Serializer
    • io.repseq.core.ReferencePoints.JSerializer
  • com.fasterxml.jackson.databind.KeyDeserializer
    • io.repseq.core.ReferencePoint.JsonKeyDeserializer
  • io.repseq.core.PartitionedSequence<S>
    • io.repseq.core.PartitionedSequenceCached<S>
      • io.repseq.core.SequenceProviderAndReferencePoints
      • io.repseq.core.VDJCGene (implements java.lang.Comparable<T>)
  • io.repseq.core.ReferencePoint (implements java.lang.Comparable<T>, java.io.Serializable)
  • io.repseq.core.ReferenceUtil
  • io.repseq.core.SequencePartitioning
    • io.repseq.core.AbstractReferencePoints<T>
      • io.repseq.core.ExtendedReferencePoints
      • io.repseq.core.ReferencePoints (implements java.io.Serializable)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • java.lang.RuntimeException
        • io.repseq.core.GeneNotFoundException
  • io.repseq.core.VDJCGeneId (implements java.lang.Comparable<T>)
  • io.repseq.core.VDJCLibrary (implements java.lang.Comparable<T>)
  • io.repseq.core.VDJCLibraryId (implements java.lang.Comparable<T>)
  • io.repseq.core.VDJCLibraryRegistry
  • io.repseq.core.VDJCLibraryRegistry.ClasspathLibraryResolver (implements io.repseq.core.VDJCLibraryRegistry.AliasResolver, io.repseq.core.VDJCLibraryRegistry.LibraryNameListProvider, io.repseq.core.VDJCLibraryRegistry.LibraryResolver)
  • io.repseq.core.VDJCLibraryRegistry.FolderLibraryResolver (implements io.repseq.core.VDJCLibraryRegistry.AliasResolver, io.repseq.core.VDJCLibraryRegistry.LibraryNameListProvider, io.repseq.core.VDJCLibraryRegistry.LibraryResolver)

Interface Hierarchy

• io.repseq.core.VDJCLibraryRegistry.AliasResolver
• io.repseq.core.VDJCLibraryRegistry.LibraryNameListProvider
• io.repseq.core.VDJCLibraryRegistry.LibraryResolver

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • io.repseq.core.GeneType (implements java.io.Serializable)