io.repseq.core

Class VDJCLibraryRegistry.FolderLibraryResolver

java.lang.Object

io.repseq.core.VDJCLibraryRegistry.FolderLibraryResolver

All Implemented Interfaces:

VDJCLibraryRegistry.AliasResolver, VDJCLibraryRegistry.LibraryNameListProvider, VDJCLibraryRegistry.LibraryResolver

Enclosing class:

VDJCLibraryRegistry

public static final class VDJCLibraryRegistry.FolderLibraryResolver
extends Object
implements VDJCLibraryRegistry.LibraryResolver, VDJCLibraryRegistry.AliasResolver, VDJCLibraryRegistry.LibraryNameListProvider

Load library data from {libraryName}.json files in specified folder.

Constructor Summary

Constructors

Constructor and Description
VDJCLibraryRegistry.FolderLibraryResolver(Path path, boolean searchForPartialNames)

Method Summary

Methods

Modifier and Type	Method and Description
Path	getContext(String libraryName)
List<String>	getLibraryNameList()
Path	getPath()
VDJCLibraryData[]	resolve(String libraryName)
String	resolveAlias(String libraryName)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VDJCLibraryRegistry.FolderLibraryResolver

public VDJCLibraryRegistry.FolderLibraryResolver(Path path,
                                         boolean searchForPartialNames)

Method Detail

getPath

public Path getPath()

getContext

public Path getContext(String libraryName)

Specified by:

getContext in interface VDJCLibraryRegistry.LibraryResolver

getLibraryNameList

public List<String> getLibraryNameList()

Specified by:

getLibraryNameList in interface VDJCLibraryRegistry.LibraryNameListProvider

resolveAlias

public String resolveAlias(String libraryName)

Specified by:

resolveAlias in interface VDJCLibraryRegistry.AliasResolver

resolve

public VDJCLibraryData[] resolve(String libraryName)

Specified by:

resolve in interface VDJCLibraryRegistry.LibraryResolver